I'd say Smith was my favorite Doctor, even if the actual stories the Eleventh got into weren't as good as they could've been. Tom Baker is a second, and then David Tennant.
I honestly look forward to the day when we have a new showrunner. Moffat was great at individual episodes but not so great at running the whole show, in my opinion. I think it was his hand that held this last Doctor back from being the best one so far.
I have pretty high hopes for the new Doctor, though they'd be higher if we had someone else at the helm of the actual plot.
Still, imagine being a Dalek going up against this: